Uses of Interface
toxTree.core.IDecisionResult

Packages that use IDecisionResult
com.molecularnetworks.start   
cramer2 Class CramerRules is the implementation of Cramer rules [Cramer et al,78]. 
eye Class SicretRules is the implementation of BfR rules for estimating skin irritation and corrosion potential. 
mic   
mic.rules   
michaelacceptors   
mutant   
mutant.rules   
sicret Class SicretRules is the implementation of BfR rules for estimating skin irritation and corrosion potential. 
toxTree.apps.toxForest   
toxTree.core This packages contains only interface definitions, defining essential classes in toxTree application. 
toxtree.data   
toxTree.io.batch Batch processing facility. 
toxtree.plugins.dnabinding   
toxtree.plugins.dnabinding.rules   
toxtree.plugins.func   
toxtree.plugins.func.rules   
toxtree.plugins.proteinbinding   
toxtree.plugins.proteinbinding.rules   
toxtree.plugins.skinsensitisation   
toxtree.plugins.skinsensitisation.rules   
toxtree.plugins.smartcyp   
toxtree.plugins.verhaar2.rules The package contains implementations of IDecisionRule rules for VerhaarScheme decision tree. 
toxTree.tree This packages contains abstract and default classes implementing the interfaces defined in toxTree.core package. 
toxTree.tree.cramer Class CramerRules is the implementation of Cramer rules [Cramer et al,78]. 
toxtree.ui.tree.categories User interface for viewing and editing categories IDecisionCategory in a decision tree IDecisionMethod 
verhaar.rules The package contains implementations of IDecisionRule rules for VerhaarScheme decision tree. 
 

Uses of IDecisionResult in com.molecularnetworks.start
 

Methods in com.molecularnetworks.start with parameters of type IDecisionResult
 java.lang.StringBuffer BiodgeradationRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in cramer2
 

Methods in cramer2 that return IDecisionResult
 IDecisionResult CramerRulesWithExtensions.createDecisionResult()
           
 

Methods in cramer2 with parameters of type IDecisionResult
 java.lang.StringBuffer CramerRulesWithExtensions.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in eye
 

Methods in eye with parameters of type IDecisionResult
 java.lang.StringBuffer EyeIrritationRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in mic
 

Methods in mic that return IDecisionResult
 IDecisionResult MICRules.createDecisionResult()
           
 

Methods in mic with parameters of type IDecisionResult
 java.lang.StringBuffer MICRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in mic.rules
 

Classes in mic.rules that implement IDecisionResult
 class MICTreeResult
           
 

Uses of IDecisionResult in michaelacceptors
 

Classes in michaelacceptors that implement IDecisionResult
 class MATreeResult
           
 

Methods in michaelacceptors that return IDecisionResult
 IDecisionResult MichaelAcceptorRules.createDecisionResult()
           
 

Methods in michaelacceptors with parameters of type IDecisionResult
 java.lang.StringBuffer MichaelAcceptorRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in mutant
 

Methods in mutant that return IDecisionResult
 IDecisionResult BB_CarcMutRules.createDecisionResult()
           
 

Methods in mutant with parameters of type IDecisionResult
 java.lang.StringBuffer BB_CarcMutRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in mutant.rules
 

Classes in mutant.rules that implement IDecisionResult
 class MutantTreeResult
           
 

Uses of IDecisionResult in sicret
 

Methods in sicret with parameters of type IDecisionResult
 java.lang.StringBuffer SicretRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxTree.apps.toxForest
 

Methods in toxTree.apps.toxForest with parameters of type IDecisionResult
 void ToxForestData.classify(IDecisionResult treeResult)
           
protected  void ToxForestData.setResult(IDecisionResult treeResult, org.openscience.cdk.interfaces.IAtomContainer molecule)
           
protected  void ToxForestDataModulePanel.viewVerboseResult(IDecisionResult result)
           
 

Uses of IDecisionResult in toxTree.core
 

Methods in toxTree.core that return IDecisionResult
 IDecisionResult IDecisionMethod.createDecisionResult()
           
 

Methods in toxTree.core with parameters of type IDecisionResult
 boolean IDecisionMethod.classify(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
           
 java.lang.StringBuffer IDecisionMethod.explainRules(IDecisionResult result, boolean verbose)
           
 boolean IDecisionMethod.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
           
 

Uses of IDecisionResult in toxtree.data
 

Fields in toxtree.data declared as IDecisionResult
protected  IDecisionResult DecisionMethodsDataModule.treeResult
           
 

Methods in toxtree.data that return IDecisionResult
 IDecisionResult DecisionMethodsDataModule.getTreeResult()
           
 

Methods in toxtree.data with parameters of type IDecisionResult
 void DecisionMethodData.classify(IDecisionResult treeResult)
           
 ConfusionMatrix DecisionMethodData.classifyAll(IDecisionResult treeResult)
           
 void DataContainer.filter(IDecisionResult treeResult)
           
 void DecisionMethodData.filterAll(IDecisionResult treeResult)
           
protected  void DecisionMethodData.setResult(IDecisionResult treeResult, org.openscience.cdk.interfaces.IAtomContainer molecule)
           
 

Uses of IDecisionResult in toxTree.io.batch
 

Fields in toxTree.io.batch declared as IDecisionResult
protected  IDecisionResult ToxTreeBatchProcessing.decisionResult
           
 

Uses of IDecisionResult in toxtree.plugins.dnabinding
 

Methods in toxtree.plugins.dnabinding that return IDecisionResult
 IDecisionResult DNABindingPlugin.createDecisionResult()
           
 

Methods in toxtree.plugins.dnabinding with parameters of type IDecisionResult
 java.lang.StringBuffer DNABindingPlugin.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.plugins.dnabinding.rules
 

Classes in toxtree.plugins.dnabinding.rules that implement IDecisionResult
 class DNABindingTreeResult
           
 

Uses of IDecisionResult in toxtree.plugins.func
 

Methods in toxtree.plugins.func that return IDecisionResult
 IDecisionResult FuncRules.createDecisionResult()
           
 

Methods in toxtree.plugins.func with parameters of type IDecisionResult
 java.lang.StringBuffer FuncRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.plugins.func.rules
 

Classes in toxtree.plugins.func.rules that implement IDecisionResult
 class FuncTreeResult
           
 

Uses of IDecisionResult in toxtree.plugins.proteinbinding
 

Methods in toxtree.plugins.proteinbinding that return IDecisionResult
 IDecisionResult ProteinBindingPlugin.createDecisionResult()
           
 

Methods in toxtree.plugins.proteinbinding with parameters of type IDecisionResult
 java.lang.StringBuffer ProteinBindingPlugin.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.plugins.proteinbinding.rules
 

Classes in toxtree.plugins.proteinbinding.rules that implement IDecisionResult
 class ProteinBindingTreeResult
           
 

Uses of IDecisionResult in toxtree.plugins.skinsensitisation
 

Methods in toxtree.plugins.skinsensitisation that return IDecisionResult
 IDecisionResult SkinSensitisationPlugin.createDecisionResult()
           
 

Methods in toxtree.plugins.skinsensitisation with parameters of type IDecisionResult
 java.lang.StringBuffer SkinSensitisationPlugin.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.plugins.skinsensitisation.rules
 

Classes in toxtree.plugins.skinsensitisation.rules that implement IDecisionResult
 class SkinSensitisationTreeResult
           
 

Uses of IDecisionResult in toxtree.plugins.smartcyp
 

Classes in toxtree.plugins.smartcyp that implement IDecisionResult
 class SMARTCypTreeResult
           
 

Methods in toxtree.plugins.smartcyp that return IDecisionResult
 IDecisionResult SMARTCYPPlugin.createDecisionResult()
           
 

Methods in toxtree.plugins.smartcyp with parameters of type IDecisionResult
 java.lang.StringBuffer SMARTCYPPlugin.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.plugins.verhaar2.rules
 

Classes in toxtree.plugins.verhaar2.rules that implement IDecisionResult
 class Verhaar2TreeResult
           
 

Uses of IDecisionResult in toxTree.tree
 

Classes in toxTree.tree that implement IDecisionResult
 class BatchDecisionResultsList
          Encapsulates DecisionResultsList as IDecisionMethod.
 class TreeResult
          A default class implementing IDecisionResult
 

Methods in toxTree.tree that return IDecisionResult
 IDecisionResult BatchDecisionResultsList.createDecisionResult()
           
 IDecisionResult AbstractTree.createDecisionResult()
           
 IDecisionResult DecisionResultsList.getResult(int index)
           
 

Methods in toxTree.tree with parameters of type IDecisionResult
 boolean BatchDecisionResultsList.classify(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
           
 boolean AbstractTree.classify(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
           
 java.lang.StringBuffer BatchDecisionResultsList.explainRules(IDecisionResult result, boolean verbose)
           
 java.lang.StringBuffer AbstractTree.explainRules(IDecisionResult result, boolean verbose)
           
protected  boolean AbstractTree.verifyResidues(org.openscience.cdk.interfaces.IAtomContainerSet mols, IDecisionResult result, IDecisionRule rule)
           
 boolean BatchDecisionResultsList.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
           
 boolean AbstractTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result)
          IDecisionRule.verifyRule(IAtomContainer)
protected  boolean UserDefinedTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result, IDecisionRule topRule)
           
protected abstract  boolean AbstractTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol, IDecisionResult result, IDecisionRule rule)
          abstract method, to be implemented in the child class
 

Uses of IDecisionResult in toxTree.tree.cramer
 

Classes in toxTree.tree.cramer that implement IDecisionResult
 class CramerTreeResult
          A descendant ot TreeResult, to be used by CramerRules.
 

Methods in toxTree.tree.cramer that return IDecisionResult
 IDecisionResult CramerRules.createDecisionResult()
           
 

Methods in toxTree.tree.cramer with parameters of type IDecisionResult
 java.lang.StringBuffer CramerRules.explainRules(IDecisionResult result, boolean verbose)
           
 

Uses of IDecisionResult in toxtree.ui.tree.categories
 

Fields in toxtree.ui.tree.categories declared as IDecisionResult
protected  IDecisionResult CategoriesPanel.result
           
 

Methods in toxtree.ui.tree.categories with parameters of type IDecisionResult
 void CategoriesPanel.setData(IDecisionCategories categories, IDecisionResult result)
           
 

Constructors in toxtree.ui.tree.categories with parameters of type IDecisionResult
CategoriesPanel(IDecisionCategories categories, IDecisionResult result)
           
 

Uses of IDecisionResult in verhaar.rules
 

Classes in verhaar.rules that implement IDecisionResult
 class VerhaarTreeResult
           
 



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