toxtree.data
Class DataModule
java.lang.Object
java.util.Observable
toxtree.data.DataModule
- All Implemented Interfaces:
- java.io.Serializable, java.util.Observer
- Direct Known Subclasses:
- DecisionMethodsDataModule
public abstract class DataModule
- extends java.util.Observable
- implements java.io.Serializable, java.util.Observer
- See Also:
- Serialized Form
Constructor Summary |
DataModule(java.io.File inputFile)
|
Methods inherited from class java.util.Observable |
addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface java.util.Observer |
update |
logger
protected static TTLogger logger
dataContainer
protected DataContainer dataContainer
useDatabase
protected int useDatabase
jcpDialog
protected ambit2.jchempaint.editor.JChemPaintDialog jcpDialog
jcpModel
protected org.openscience.cdk.interfaces.IChemModel jcpModel
batch
protected BatchProcessing batch
DataModule
public DataModule(java.io.File inputFile)
batch
public void batch(BatchProcessing bp)
getDataContainer
public DataContainer getDataContainer()
editMolecule
public void editMolecule(boolean editable,
javax.swing.JFrame frame)
getActions
public abstract ActionList getActions()
createDataContainer
protected abstract DataContainer createDataContainer(java.io.File inputFile)
viewMethod
public abstract void viewMethod(IDecisionMethod method,
boolean editable)
throws DecisionMethodException
- Throws:
DecisionMethodException
showMetabolites
public java.lang.String showMetabolites()
throws java.lang.Exception
- Throws:
java.lang.Exception
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