mutant.rules
Class RuleDAMutagenicityABUnsaturatedAldehydes
java.lang.Object
java.util.Observable
toxTree.tree.AbstractRule
toxTree.qsar.LinearDiscriminantRule
mutant.rules.RuleDAMutagenicityABUnsaturatedAldehydes
- All Implemented Interfaces:
- java.io.Serializable, java.lang.Cloneable, IDecisionRule, IDescriptorBased, IImplementationDetails, XMLSerializable
public class RuleDAMutagenicityABUnsaturatedAldehydes
- extends LinearDiscriminantRule
Returns true if structure is predicted as mutagen , based on linear discriminant analysis over descriptors MR, LogP, LUMO.
- Author:
- nina
- See Also:
- Serialized Form
Fields inherited from class toxTree.tree.AbstractRule |
changes, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, title |
Fields inherited from interface toxTree.core.XMLSerializable |
xmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT |
Methods inherited from class toxTree.tree.AbstractRule |
addPropertyChangeListener, clearFlags, clone, createRule, equals, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, getTitle, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXML |
Methods inherited from class java.util.Observable |
addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
RuleDAMutagenicityABUnsaturatedAldehydes
public RuleDAMutagenicityABUnsaturatedAldehydes()
createMutagenicityofAldehydesModel
public static LinearQSARModel createMutagenicityofAldehydesModel()
compare
protected boolean compare(double value,
double threshold)
- Classified as mutagens if lower than the threshold
- Overrides:
compare
in class LinearDiscriminantRule
getImplementationDetails
public java.lang.String getImplementationDetails()
- Specified by:
getImplementationDetails
in interface IImplementationDetails
- Overrides:
getImplementationDetails
in class LinearDiscriminantRule
createException
protected DRuleException createException(ambit2.base.exceptions.QSARModelException x)
- Specified by:
createException
in class LinearDiscriminantRule
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