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Packages that use DecisionResultException | |
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cramer2.categories | |
mic.rules | |
michaelacceptors | |
mutant.rules | |
toxTree.apps.toxForest | |
toxTree.core | This packages contains only interface definitions, defining essential classes in toxTree application. |
toxtree.data | |
toxTree.exceptions | Exceptions defined for toxTree classes |
toxtree.plugins.dnabinding.rules | |
toxtree.plugins.func.rules | |
toxtree.plugins.proteinbinding.rules | |
toxtree.plugins.skinsensitisation.rules | |
toxtree.plugins.smartcyp | |
toxtree.plugins.verhaar2.rules | The package contains implementations of IDecisionRule
rules for VerhaarScheme decision tree. |
toxTree.tree | This packages contains abstract and default classes implementing the interfaces
defined in toxTree.core package. |
toxTree.tree.cramer | Class CramerRules is the implementation of Cramer rules [Cramer et al,78]. |
verhaar.rules | The package contains implementations of IDecisionRule
rules for VerhaarScheme decision tree. |
Uses of DecisionResultException in cramer2.categories |
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Methods in cramer2.categories that throw DecisionResultException | |
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void |
CramerTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
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void |
CramerTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
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Uses of DecisionResultException in mic.rules |
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Methods in mic.rules that throw DecisionResultException | |
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void |
MICTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
MICTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
MICTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
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Uses of DecisionResultException in michaelacceptors |
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Methods in michaelacceptors that throw DecisionResultException | |
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void |
MATreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
Uses of DecisionResultException in mutant.rules |
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Methods in mutant.rules that throw DecisionResultException | |
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void |
MutantTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
MutantTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
MutantTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxTree.apps.toxForest |
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Methods in toxTree.apps.toxForest that throw DecisionResultException | |
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void |
ToxForestData.classify(IDecisionResult treeResult)
|
ConfusionMatrix |
ToxForestData.classifyAll(IDecisionMethodsList methods)
|
Uses of DecisionResultException in toxTree.core |
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Methods in toxTree.core that throw DecisionResultException | |
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void |
IDecisionResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
IDecisionResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
boolean |
IDecisionResult.classify(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.lang.StringBuffer |
IDecisionResult.explain(boolean verbose)
|
IDecisionCategory |
IDecisionResult.getCategory(int index)
|
org.openscience.cdk.interfaces.IAtomContainer |
IDecisionResult.getMolecule(int index)
|
IDecisionRule |
IDecisionResult.getRule(int index)
|
RuleResult |
IDecisionResult.getRuleResult(int index)
|
void |
IDecisionResult.hilightAlert(IDecisionRule rule)
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void |
IDecisionResult.hilightAlert(RuleResult ruleresult)
|
void |
IDecisionResult.setMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
IDecisionResult.setSilent(boolean silent)
|
Uses of DecisionResultException in toxtree.data |
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Methods in toxtree.data that throw DecisionResultException | |
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void |
DecisionMethodData.classify(IDecisionResult treeResult)
|
ConfusionMatrix |
DecisionMethodData.classifyAll(IDecisionMethodsList methods)
|
ConfusionMatrix |
DecisionMethodData.classifyAll(IDecisionResult treeResult)
|
void |
DecisionMethodData.filterAll(IDecisionResult treeResult)
|
Uses of DecisionResultException in toxTree.exceptions |
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Subclasses of DecisionResultException in toxTree.exceptions | |
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class |
DCategoryUnknown
TODO Add DCategoryUnassigned description |
class |
DecisionResultIOException
|
class |
DecisionResultUIDException
|
class |
DMethodNotAssigned
TODO Add MethodNotAssigned description |
Uses of DecisionResultException in toxtree.plugins.dnabinding.rules |
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Methods in toxtree.plugins.dnabinding.rules that throw DecisionResultException | |
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void |
DNABindingTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
DNABindingTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
DNABindingTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxtree.plugins.func.rules |
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Methods in toxtree.plugins.func.rules that throw DecisionResultException | |
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void |
FuncTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
FuncTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
FuncTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxtree.plugins.proteinbinding.rules |
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Methods in toxtree.plugins.proteinbinding.rules that throw DecisionResultException | |
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void |
ProteinBindingTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
ProteinBindingTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
ProteinBindingTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxtree.plugins.skinsensitisation.rules |
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Methods in toxtree.plugins.skinsensitisation.rules that throw DecisionResultException | |
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void |
SkinSensitisationTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
SkinSensitisationTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
SkinSensitisationTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxtree.plugins.smartcyp |
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Methods in toxtree.plugins.smartcyp that throw DecisionResultException | |
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void |
SMARTCypTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.util.Hashtable<java.lang.String,java.lang.String> |
SMARTCypTreeResult.getExplanation(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxtree.plugins.verhaar2.rules |
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Methods in toxtree.plugins.verhaar2.rules that throw DecisionResultException | |
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void |
Verhaar2TreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in toxTree.tree |
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Methods in toxTree.tree that throw DecisionResultException | |
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void |
TreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
BatchDecisionResultsList.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
TreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
void |
BatchDecisionResultsList.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
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boolean |
TreeResult.classify(org.openscience.cdk.interfaces.IAtomContainer mol)
|
boolean |
BatchDecisionResultsList.classify(org.openscience.cdk.interfaces.IAtomContainer mol)
|
java.lang.StringBuffer |
TreeResult.explain(boolean verbose)
return StringBuffer with textual explanation of the rules executed |
java.lang.StringBuffer |
BatchDecisionResultsList.explain(boolean verbose)
|
IDecisionCategory |
TreeResult.getCategory(int index)
|
IDecisionCategory |
BatchDecisionResultsList.getCategory(int index)
|
org.openscience.cdk.interfaces.IAtomContainer |
TreeResult.getMolecule(int index)
|
org.openscience.cdk.interfaces.IAtomContainer |
BatchDecisionResultsList.getMolecule(int index)
|
IDecisionRule |
TreeResult.getRule(int index)
|
RuleResult |
TreeResult.getRuleResult(int index)
|
RuleResult |
BatchDecisionResultsList.getRuleResult(int index)
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void |
TreeResult.hilightAlert(IDecisionRule rule)
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void |
BatchDecisionResultsList.hilightAlert(IDecisionRule rule)
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void |
TreeResult.hilightAlert(RuleResult ruleResult)
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void |
BatchDecisionResultsList.hilightAlert(RuleResult ruleresult)
|
void |
BatchDecisionResultsList.setMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
TreeResult.setSilent(boolean silent)
|
void |
BatchDecisionResultsList.setSilent(boolean silent)
|
Uses of DecisionResultException in toxTree.tree.cramer |
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Methods in toxTree.tree.cramer that throw DecisionResultException | |
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void |
CramerTreeResult.addRuleResult(IDecisionRule rule,
boolean value,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
void |
CramerTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
|
Uses of DecisionResultException in verhaar.rules |
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Methods in verhaar.rules that throw DecisionResultException | |
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void |
VerhaarTreeResult.assignResult(org.openscience.cdk.interfaces.IAtomContainer mol)
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