toxTree.core
Interface IMoleculesIterator
- All Superinterfaces:
- java.util.Iterator
- All Known Subinterfaces:
- IFilteredMolecules
- All Known Implementing Classes:
- FilteredMoleculesIterator, MoleculesIterator
public interface IMoleculesIterator
- extends java.util.Iterator
Methods inherited from interface java.util.Iterator |
hasNext, next, remove |
MSG_UNSUPPORTEDFORMAT
static final java.lang.String MSG_UNSUPPORTEDFORMAT
- See Also:
- Constant Field Values
MSG_ERRORONSAVE
static final java.lang.String MSG_ERRORONSAVE
- See Also:
- Constant Field Values
MSG_ERRORONOPEN
static final java.lang.String MSG_ERRORONOPEN
- See Also:
- Constant Field Values
MSG_SAVESUCCESS
static final java.lang.String MSG_SAVESUCCESS
- See Also:
- Constant Field Values
MSG_OPENSUCCESS
static final java.lang.String MSG_OPENSUCCESS
- See Also:
- Constant Field Values
MSG_EMPTYFILE
static final java.lang.String MSG_EMPTYFILE
- See Also:
- Constant Field Values
first
java.lang.Object first()
last
java.lang.Object last()
prev
java.lang.Object prev()
clear
void clear()
isReading
boolean isReading()
isWriting
boolean isWriting()
getStatus
java.lang.String getStatus()
getMoleculesCount
int getMoleculesCount()
getCurrentNo
int getCurrentNo()
setCurrentNo
org.openscience.cdk.interfaces.IAtomContainer setCurrentNo(int record)
getMolecules
org.openscience.cdk.interfaces.IAtomContainer[] getMolecules()
setMolecules
void setMolecules(java.util.List molecules)
getMolecule
org.openscience.cdk.interfaces.IAtomContainer getMolecule()
getMoleculeForEdit
org.openscience.cdk.interfaces.IMoleculeSet getMoleculeForEdit()
throws java.lang.Exception
- Throws:
java.lang.Exception
getAtomContainer
org.openscience.cdk.interfaces.IAtomContainer getAtomContainer(int index)
addMolecule
void addMolecule(org.openscience.cdk.interfaces.IAtomContainer mol)
setMolecule
void setMolecule(org.openscience.cdk.interfaces.IAtomContainer mol)
setReading
void setReading()
setWriting
void setWriting()
setDone
void setDone(boolean success)
getFilename
java.lang.String getFilename()
openFile
java.util.List openFile(java.io.File input)
throws ToxTreeIOException
- Throws:
ToxTreeIOException
saveFile
void saveFile(java.io.File output)
throws ToxTreeIOException
- Throws:
ToxTreeIOException
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