toxTree.tree.rules
Class RuleDescriptor
java.lang.Object
java.util.Observable
toxTree.tree.AbstractRule
toxTree.tree.rules.RuleDescriptor
- All Implemented Interfaces:
- java.io.Serializable, java.lang.Cloneable, IDecisionRule, XMLSerializable
- Direct Known Subclasses:
- RuleDescriptorRange, RuleLipinski5
public abstract class RuleDescriptor
- extends AbstractRule
An abstract class to allow for descriptor analysis
- Author:
- Nina Jeliazkova
Modified 2005-10-18
- See Also:
- Serialized Form
Fields inherited from class toxTree.tree.AbstractRule |
changes, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, title |
Fields inherited from interface toxTree.core.XMLSerializable |
xmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT |
Method Summary |
boolean |
equals(java.lang.Object obj)
|
org.openscience.cdk.qsar.IDescriptor |
getDescriptor()
|
ambit2.base.interfaces.IProcessor<org.openscience.cdk.interfaces.IAtomContainer,org.openscience.cdk.renderer.selection.IChemObjectSelection> |
getSelector()
|
boolean |
isImplemented()
|
void |
setDescriptor(org.openscience.cdk.qsar.IDescriptor descriptor)
|
boolean |
verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol,
org.openscience.cdk.interfaces.IAtomContainer selected)
|
Methods inherited from class toxTree.tree.AbstractRule |
addPropertyChangeListener, clearFlags, clone, createRule, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, getTitle, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXML |
Methods inherited from class java.util.Observable |
addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
descriptor
protected transient org.openscience.cdk.qsar.IDescriptor descriptor
descriptorClass
protected java.lang.String descriptorClass
RuleDescriptor
public RuleDescriptor()
getDescriptor
public org.openscience.cdk.qsar.IDescriptor getDescriptor()
setDescriptor
public void setDescriptor(org.openscience.cdk.qsar.IDescriptor descriptor)
isImplemented
public boolean isImplemented()
- Specified by:
isImplemented
in interface IDecisionRule
- Overrides:
isImplemented
in class AbstractRule
- Returns:
- false if the rule is not implemented and true if it is
equals
public boolean equals(java.lang.Object obj)
- Overrides:
equals
in class AbstractRule
verifyRule
public boolean verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol,
org.openscience.cdk.interfaces.IAtomContainer selected)
throws DecisionMethodException
- Throws:
DecisionMethodException
getSelector
public ambit2.base.interfaces.IProcessor<org.openscience.cdk.interfaces.IAtomContainer,org.openscience.cdk.renderer.selection.IChemObjectSelection> getSelector()
- Specified by:
getSelector
in interface IDecisionRule
- Overrides:
getSelector
in class AbstractRule
Copyright © 2004-2012 Ideaconsult Ltd.. All Rights Reserved.