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Packages that use IDecisionResult | |
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com.molecularnetworks.start | |
cramer2 | Class CramerRules is the implementation of Cramer rules [Cramer et al,78]. |
eye | Class SicretRules is the implementation of BfR rules for estimating skin irritation and corrosion potential. |
mic | |
mic.rules | |
michaelacceptors | |
mutant | |
mutant.rules | |
sicret | Class SicretRules is the implementation of BfR rules for estimating skin irritation and corrosion potential. |
toxTree.apps.toxForest | |
toxTree.core | This packages contains only interface definitions, defining essential classes in toxTree application. |
toxtree.data | |
toxTree.io.batch | Batch processing facility. |
toxtree.plugins.dnabinding | |
toxtree.plugins.dnabinding.rules | |
toxtree.plugins.func | |
toxtree.plugins.func.rules | |
toxtree.plugins.proteinbinding | |
toxtree.plugins.proteinbinding.rules | |
toxtree.plugins.skinsensitisation | |
toxtree.plugins.skinsensitisation.rules | |
toxtree.plugins.smartcyp | |
toxtree.plugins.verhaar2.rules | The package contains implementations of IDecisionRule
rules for VerhaarScheme decision tree. |
toxTree.tree | This packages contains abstract and default classes implementing the interfaces
defined in toxTree.core package. |
toxTree.tree.cramer | Class CramerRules is the implementation of Cramer rules [Cramer et al,78]. |
toxtree.ui.tree.categories | User interface for viewing and editing categories IDecisionCategory in a decision tree IDecisionMethod |
verhaar.rules | The package contains implementations of IDecisionRule
rules for VerhaarScheme decision tree. |
Uses of IDecisionResult in com.molecularnetworks.start |
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Methods in com.molecularnetworks.start with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
BiodgeradationRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in cramer2 |
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Methods in cramer2 that return IDecisionResult | |
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IDecisionResult |
CramerRulesWithExtensions.createDecisionResult()
|
Methods in cramer2 with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
CramerRulesWithExtensions.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in eye |
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Methods in eye with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
EyeIrritationRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in mic |
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Methods in mic that return IDecisionResult | |
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IDecisionResult |
MICRules.createDecisionResult()
|
Methods in mic with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
MICRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in mic.rules |
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Classes in mic.rules that implement IDecisionResult | |
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class |
MICTreeResult
|
Uses of IDecisionResult in michaelacceptors |
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Classes in michaelacceptors that implement IDecisionResult | |
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class |
MATreeResult
|
Methods in michaelacceptors that return IDecisionResult | |
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IDecisionResult |
MichaelAcceptorRules.createDecisionResult()
|
Methods in michaelacceptors with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
MichaelAcceptorRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in mutant |
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Methods in mutant that return IDecisionResult | |
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IDecisionResult |
BB_CarcMutRules.createDecisionResult()
|
Methods in mutant with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
BB_CarcMutRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in mutant.rules |
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Classes in mutant.rules that implement IDecisionResult | |
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class |
MutantTreeResult
|
Uses of IDecisionResult in sicret |
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Methods in sicret with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
SicretRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxTree.apps.toxForest |
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Methods in toxTree.apps.toxForest with parameters of type IDecisionResult | |
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void |
ToxForestData.classify(IDecisionResult treeResult)
|
protected void |
ToxForestData.setResult(IDecisionResult treeResult,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
protected void |
ToxForestDataModulePanel.viewVerboseResult(IDecisionResult result)
|
Uses of IDecisionResult in toxTree.core |
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Methods in toxTree.core that return IDecisionResult | |
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IDecisionResult |
IDecisionMethod.createDecisionResult()
|
Methods in toxTree.core with parameters of type IDecisionResult | |
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boolean |
IDecisionMethod.classify(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
|
java.lang.StringBuffer |
IDecisionMethod.explainRules(IDecisionResult result,
boolean verbose)
|
boolean |
IDecisionMethod.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
|
Uses of IDecisionResult in toxtree.data |
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Fields in toxtree.data declared as IDecisionResult | |
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protected IDecisionResult |
DecisionMethodsDataModule.treeResult
|
Methods in toxtree.data that return IDecisionResult | |
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IDecisionResult |
DecisionMethodsDataModule.getTreeResult()
|
Methods in toxtree.data with parameters of type IDecisionResult | |
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void |
DecisionMethodData.classify(IDecisionResult treeResult)
|
ConfusionMatrix |
DecisionMethodData.classifyAll(IDecisionResult treeResult)
|
void |
DataContainer.filter(IDecisionResult treeResult)
|
void |
DecisionMethodData.filterAll(IDecisionResult treeResult)
|
protected void |
DecisionMethodData.setResult(IDecisionResult treeResult,
org.openscience.cdk.interfaces.IAtomContainer molecule)
|
Uses of IDecisionResult in toxTree.io.batch |
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Fields in toxTree.io.batch declared as IDecisionResult | |
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protected IDecisionResult |
ToxTreeBatchProcessing.decisionResult
|
Uses of IDecisionResult in toxtree.plugins.dnabinding |
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Methods in toxtree.plugins.dnabinding that return IDecisionResult | |
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IDecisionResult |
DNABindingPlugin.createDecisionResult()
|
Methods in toxtree.plugins.dnabinding with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
DNABindingPlugin.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.plugins.dnabinding.rules |
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Classes in toxtree.plugins.dnabinding.rules that implement IDecisionResult | |
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class |
DNABindingTreeResult
|
Uses of IDecisionResult in toxtree.plugins.func |
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Methods in toxtree.plugins.func that return IDecisionResult | |
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IDecisionResult |
FuncRules.createDecisionResult()
|
Methods in toxtree.plugins.func with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
FuncRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.plugins.func.rules |
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Classes in toxtree.plugins.func.rules that implement IDecisionResult | |
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class |
FuncTreeResult
|
Uses of IDecisionResult in toxtree.plugins.proteinbinding |
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Methods in toxtree.plugins.proteinbinding that return IDecisionResult | |
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IDecisionResult |
ProteinBindingPlugin.createDecisionResult()
|
Methods in toxtree.plugins.proteinbinding with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
ProteinBindingPlugin.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.plugins.proteinbinding.rules |
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Classes in toxtree.plugins.proteinbinding.rules that implement IDecisionResult | |
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class |
ProteinBindingTreeResult
|
Uses of IDecisionResult in toxtree.plugins.skinsensitisation |
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Methods in toxtree.plugins.skinsensitisation that return IDecisionResult | |
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IDecisionResult |
SkinSensitisationPlugin.createDecisionResult()
|
Methods in toxtree.plugins.skinsensitisation with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
SkinSensitisationPlugin.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.plugins.skinsensitisation.rules |
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Classes in toxtree.plugins.skinsensitisation.rules that implement IDecisionResult | |
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class |
SkinSensitisationTreeResult
|
Uses of IDecisionResult in toxtree.plugins.smartcyp |
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Classes in toxtree.plugins.smartcyp that implement IDecisionResult | |
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class |
SMARTCypTreeResult
|
Methods in toxtree.plugins.smartcyp that return IDecisionResult | |
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IDecisionResult |
SMARTCYPPlugin.createDecisionResult()
|
Methods in toxtree.plugins.smartcyp with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
SMARTCYPPlugin.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.plugins.verhaar2.rules |
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Classes in toxtree.plugins.verhaar2.rules that implement IDecisionResult | |
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class |
Verhaar2TreeResult
|
Uses of IDecisionResult in toxTree.tree |
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Classes in toxTree.tree that implement IDecisionResult | |
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class |
BatchDecisionResultsList
Encapsulates DecisionResultsList as IDecisionMethod . |
class |
TreeResult
A default class implementing IDecisionResult |
Methods in toxTree.tree that return IDecisionResult | |
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IDecisionResult |
BatchDecisionResultsList.createDecisionResult()
|
IDecisionResult |
AbstractTree.createDecisionResult()
|
IDecisionResult |
DecisionResultsList.getResult(int index)
|
Methods in toxTree.tree with parameters of type IDecisionResult | |
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boolean |
BatchDecisionResultsList.classify(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
|
boolean |
AbstractTree.classify(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
|
java.lang.StringBuffer |
BatchDecisionResultsList.explainRules(IDecisionResult result,
boolean verbose)
|
java.lang.StringBuffer |
AbstractTree.explainRules(IDecisionResult result,
boolean verbose)
|
protected boolean |
AbstractTree.verifyResidues(org.openscience.cdk.interfaces.IAtomContainerSet mols,
IDecisionResult result,
IDecisionRule rule)
|
boolean |
BatchDecisionResultsList.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
|
boolean |
AbstractTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result)
IDecisionRule.verifyRule(IAtomContainer) |
protected boolean |
UserDefinedTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result,
IDecisionRule topRule)
|
protected abstract boolean |
AbstractTree.verifyRules(org.openscience.cdk.interfaces.IAtomContainer mol,
IDecisionResult result,
IDecisionRule rule)
abstract method, to be implemented in the child class |
Uses of IDecisionResult in toxTree.tree.cramer |
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Classes in toxTree.tree.cramer that implement IDecisionResult | |
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class |
CramerTreeResult
A descendant ot TreeResult , to be used by CramerRules . |
Methods in toxTree.tree.cramer that return IDecisionResult | |
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IDecisionResult |
CramerRules.createDecisionResult()
|
Methods in toxTree.tree.cramer with parameters of type IDecisionResult | |
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java.lang.StringBuffer |
CramerRules.explainRules(IDecisionResult result,
boolean verbose)
|
Uses of IDecisionResult in toxtree.ui.tree.categories |
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Fields in toxtree.ui.tree.categories declared as IDecisionResult | |
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protected IDecisionResult |
CategoriesPanel.result
|
Methods in toxtree.ui.tree.categories with parameters of type IDecisionResult | |
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void |
CategoriesPanel.setData(IDecisionCategories categories,
IDecisionResult result)
|
Constructors in toxtree.ui.tree.categories with parameters of type IDecisionResult | |
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CategoriesPanel(IDecisionCategories categories,
IDecisionResult result)
|
Uses of IDecisionResult in verhaar.rules |
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Classes in verhaar.rules that implement IDecisionResult | |
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class |
VerhaarTreeResult
|
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